EnteroBase
latest
About EnteroBase
Frequently Asked Questions
Enterobase Terms and Conditions
How EnteroBase uses your personal data (GDPR)
Getting Started - Registering and logging in
EnteroBase tutorials and worked examples
Presentations and Lectures about EnteroBase
About schemes within EnteroBase (cg/wg/r/MLST)
HierCC (Hierarchical Clustering of CgMLST)
GrapeTree Documentation
Key features in Enterobase
Enterobase API Usage
Backend pipelines
HierCC equivalents
Precomputed species trees
Salmonella
database
Escherichia
database (ECORPlus collection)
Streptococcus
database
Clostridioides
database
Vibrio
database
Yersinia
database
Documentation previously on mlst.warwick.ac.uk
Developing EnteroBase (Developers only)
Introduction
Database structure
GUI and displaying results
Schemes
Tools and Pipelines
Maintenance and support
Local EnteroBase’s documentation
EnteroBase
Precomputed species trees
Edit on Bitbucket
Precomputed species trees
¶
Salmonella
database
¶
Core genomic SNPs
Accessory gene presences
Escherichia
database (ECORPlus collection)
¶
Core genomic SNPs
Accessory gene presences
Streptococcus
database
¶
Core genomic SNPs
Accessory gene presences
Clostridioides
database
¶
Core genomic SNPs
Accessory gene presences
Vibrio
database
¶
Core genomic SNPs
Accessory gene presences
Yersinia
database
¶
Core genomic SNPs
Accessory gene presences
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