- HC900 & HC2000: HC900 is equivalent to eBG (eBurstGroup) in legacy 7-gene MLST, which is shown to be natural population that is consistent with serovars. Thus we have given HC900 a trivial name as “ceBG” (cgMLST eBurstGroup). We also exploited a further clustering of cgSTs at HC2000 level. salmonellae of different eBG groups (serovars) grouped together at this level.
A mapping table between HC900 and HC2000 versus serovars
- HC2850: HC2850 in Salmonella corresponds to the separation of subspecies and species in the genus.
A mapping table between HC2850 and Salmonella species and Clades