A Powerful, User-Friendly Online Resource for Analyzing and Visualizing Genomic Variation within Enteric Bacteria


EnteroBase aims to establish a world-class, one-stop, user-friendly, backwards-compatible but forward-looking genome database, Enterobase – together with a set of web-based tools, EnteroBase Backend Pipeline – to enable bacteriologists to identify, analyse, quantify and visualise genomic variation principally within the genera:


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Funded by BBSRC research grant BB/L020319/1.


If you use data/metadata from the website, or the analysis based on these data, please cite EnteroBase as:

Alikhan NF, Zhou Z,Sergeant MJ, Achtman M (2018) “A genomic overview of the population structure of Salmonella.” PLoS Genet 14 (4): e1007261. https://doi.org/10.1371/journal.pgen.1007261

If you use GrapeTree please cite:

Zhou Z, Alikhan NF, Sergeant MJ, Luhmann N, Vaz C, Francisco AP, Carrico JA, Achtman M (2018) “GrapeTree: Visualization of core genomic relationships among 100,000 bacterial pathogens”, Genome Research; https://doi.org/10.1101/gr.232397.117